In 1792 the Reverend John Rooker and his wife, Anna, along with 11 friends joined to establish the Sugar Creek Baptist Church of Christ. It later became known as Flint Hill Baptist Church, named for the huge outcropping of flint rock located in front.
The first church building was log, replaced by a larger log building in 1811. In 1828 a frame building encompassed the log building. In 1855 a larger 60 feet by 40 feet building was built. The present building was completed in 1908.